RetrogeneDB ID: | retro_mputfur_1212 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897043.1:2615202..2615650(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMPUG00000008977 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000015547 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.74 % |
Parental protein coverage: | 56.88 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | EIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVAT |
EIY.FSL.IKESEI.DFF.G...KDEVLK.M.VQKQ...GQ.T.FKAFVAIGD.NG...LGVK..KEVA. | |
Retrocopy | EIYFFSLHIKESEITDFFPG-NIKDEVLKTMLVQKQICVGQWTKFKAFVAIGDDNGYNALGVKWFKEVA- |
Parental | AIRGAIILAKLSIV-PVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAG |
.I.G..I..KLSI..PV..GY.GNKIGKPHTVPC.VTG.CGSVL.R.IP.PRGTG....P.PKKLLM.A. | |
Retrocopy | -ICGVMIPDKLSID<PVW*GYMGNKIGKPHTVPCMVTGHCGSVLGRPIPGPRGTGTAITPIPKKLLMVAS |
Parental | IDD-CYTSARGCTAT |
.DD....SAR.CTAT | |
Retrocopy | TDD<QVPSARDCTAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000002549 | 1 retrocopy | |
Bos taurus | ENSBTAG00000009535 | 7 retrocopies | |
Loxodonta africana | ENSLAFG00000004696 | 11 retrocopies | |
Macropus eugenii | ENSMEUG00000004508 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000011660 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000016077 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015547 | 11 retrocopies | |
Procavia capensis | ENSPCAG00000002090 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000015213 | 5 retrocopies | |
Tursiops truncatus | ENSTTRG00000011393 | 12 retrocopies | |
Vicugna pacos | ENSVPAG00000006867 | 6 retrocopies |