RetrogeneDB ID: | retro_shar_763 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL864507.1:17158..17701(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RAC2 | ||
Ensembl ID: | ENSSHAG00000014852 | ||
Aliases: | None | ||
Description: | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) [Source:HGNC Symbol;Acc:9802] |
Percent Identity: | 62.03 % |
Parental protein coverage: | 94.79 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 5 |
Parental | DGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVF- |
.G..GKT.LLI.Y.TN.F..EYI.TV.F.NY.AN.MV..K..NL.L.DTAGQ.DYDR...LS..QT.VF. | |
Retrocopy | NGVLGKTFLLINYMTNVFFSEYITTV<FNNYAANIMVNKKYINLNLLDTAGQIDYDRFCLLSHLQTYVF< |
Parental | LICFSLVSPASYENVRA-KWYPEVRHHCPSTPIILVGTKLDLRDDKDTIEK-LKEKKLTPITYPQGLALA |
L.CFSLV.PASYEN....K.YPE..HHCP..PIILVGTKLD.RDDKD.IEK.LKEKK.TPIT.PQ.LA.A | |
Retrocopy | LTCFSLVNPASYENDHE<K*YPEM*HHCPNIPIILVGTKLDIRDDKDMIEK>LKEKKMTPIT*PQSLAVA |
Parental | KEIDSVKYLECSALTQRGLKTV-FDEAIRAVLCPQPTRQQKRPCSLL |
K.I..VKYL.CSA....GLKTV..........CP.P....KR.C.LL | |
Retrocopy | KRIGAVKYLKCSAFP*AGLKTV<LIKLLEQDFCPSPVKKRKRKCLLL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |