RetrogeneDB ID: | retro_tsyr_2045 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_8303:29423..29810(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSTSYG00000013635 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 52.55 % |
Parental protein coverage: | 83.54 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | GKGTARRKKKVVHRTATAD-DKKLQSS-LKKLAVNNIAGIEEVNMIKDDG-TVIHFNNPKV-QASLSANT |
GK..A..KK.V..RTA.A..DK.L.SS..K.LAV....G.EE...I...G..V.H.NNPKV.Q.SL..N. | |
Retrocopy | GKNRAHGKKEV-RRTAMAE<DKTLRSS<SKELAVESLSGVEELTVIENGG<AVAHLNNPKV<QPSLPVNS |
Parental | FAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPR-QVLDSKAPKPEDIDEEDDDVPDLVEN |
...TG.AEA.PI.E.LPG.LSQLGADSLTSL.......P..QV..SKAP.P.D.D.E..D.....EN | |
Retrocopy | SVVTGRAEASPIPETLPGMLSQLGADSLTSL-EVSQVVPM>QVSNSKAPSPADTDVENFDEASKKEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |