RetrogeneDB ID: | retro_meug_1333 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold370765:511..978(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSMEUG00000006135 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 75.47 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MNQEKLAKLQAQVRIGGKGTAR-RKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHF |
MNQEKLAKLQ.QV.IGGK.TAR.RKKKVVHRTAT..DKKLQ.SLKKL.VNNI.GIEEVNM....GTVIHF | |
Retrocopy | MNQEKLAKLQTQVHIGGK*TAR<RKKKVVHRTATTEDKKLQFSLKKL*VNNISGIEEVNMFTNQGTVIHF |
Parental | NNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEED |
NNPKV.ASL.ANTF.ITGHAE.K..TEMLP.IL.QLGADSLTSLR.LAE..P.Q....KAP......E.D | |
Retrocopy | NNPKVKASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQPVNGKAPLA--TGEDD |
Parental | DDVPDLVENFDEASKNEAN |
D.V.DL.ENFDEASKNEAN | |
Retrocopy | DEVSDLIENFDEASKNEAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |