RetrogeneDB ID: | retro_meug_1114 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold29540:20236..20701(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSMEUG00000006135 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 74.52 % |
Parental protein coverage: | 99.37 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFN |
MNQ.KLAKLQAQVR.GGKGTARRKK.VVH.TAT.DDKKLQ.SLKKL.VNNI.G.EEVNM....GTVIHFN | |
Retrocopy | MNQQKLAKLQAQVRTGGKGTARRKK-VVHGTATEDDKKLQFSLKKLGVNNISGTEEVNMFTNQGTVIHFN |
Parental | NPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDD |
NP.V.ASL.ANTF.ITGHAE.K..TEMLP..L.QLGADSLTSLR.LAE..P.Q....KAP........DD | |
Retrocopy | NPRV*ASLAANTFTITGHAETKQLTEMLPSVLNQLGADSLTSLRRLAEVLPKQPVYGKAPLATG-EDDDD |
Parental | DVPDLVENFDEASKNEA |
.VPDLVENFDEASKNEA | |
Retrocopy | EVPDLVENFDEASKNEA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |