Parental gene:

BTF3L4, ENSOGAG00000030256

Aliases:None
Description:basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873678.1:792170..814162(-)


>ENSOGAG00000030256
TCTGAGGCAGCCATCTTGCTCTTGCCGCGTGCTGGTGTTGGAGGACCCTCCCGCTTCAGATTTACCAACAGCATGAATCA
AGAAAAGTTAGCCAAACTTCAGGCTCAGGTCCGGATAGGGGGCAAGAACTTAGGAAATAGAGAAAAAATAGATAGCCACA
GGTGCCATGCTACCAAGGACAGAAAAATCCGAAGCTTTCAGAAAAAACAATTGATTTTAACTGATTTATTTGTGATCATA
CAGGTGAACATGATTAAAGATGATGGGACAGTTATTCATTTCAACAATCCCAAAGTCCAAGCTTCCCTCTCTGCTAACAC
CTTTGCAATTACCGGTCATGCAGAAGCTAAACCAATTACAGAAATGCTTCCTGGAATATTAAGTCAGCTTGGTGCTGACA
GCTTAACAAGCCTTAGGAAGTTAGCTGAACAGTTCCCACGGCAAGTCCTGGATAGCAAAGCACCAAAACCAGATGACATT
GATGAGGAAGATGATGACGTTCCA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011025 possible_ortholog 1 retrogene
retro_btau_1030,
Canis familiaris ENSCAFG00000003782 possible_ortholog 2 retrogenes
retro_cfam_2135, retro_cfam_938,
Callithrix jacchus ENSCJAG00000021582 possible_ortholog 4 retrogenes
retro_cjac_2000, retro_cjac_2929, retro_cjac_4160, retro_cjac_451,
Cavia porcellus ENSCPOG00000004006 ortholog_one2many 1 retrogene
retro_cpor_908,
Ciona savignyi ENSCSAVG00000009653 ortholog_one2many 1 retrogene
retro_csav_25,
Dasypus novemcinctus ENSDNOG00000003181 ortholog_one2many 4 retrogenes
retro_dnov_1690, retro_dnov_1928, retro_dnov_2672, retro_dnov_921,
Echinops telfairi ENSETEG00000011923 ortholog_one2many 11 retrogenes
retro_etel_1017, retro_etel_1167, retro_etel_1207, retro_etel_1409, retro_etel_1990, retro_etel_2113, retro_etel_2203, retro_etel_291, retro_etel_663, retro_etel_804, retro_etel_953,
Loxodonta africana ENSLAFG00000016124 ortholog_one2many 3 retrogenes
retro_lafr_206, retro_lafr_769, retro_lafr_947,
Macropus eugenii ENSMEUG00000006135 ortholog_one2many 10 retrogenes
retro_meug_1114, retro_meug_1164, retro_meug_1333, retro_meug_1395, retro_meug_1512, retro_meug_1663, retro_meug_2008, retro_meug_298, retro_meug_903, retro_meug_966,
Myotis lucifugus ENSMLUG00000016884 possible_ortholog 1 retrogene
retro_mluc_912,
Macaca mulatta ENSMMUG00000003636 possible_ortholog 1 retrogene
retro_mmul_59,
Monodelphis domestica ENSMODG00000000770 ortholog_many2many 2 retrogenes
retro_mdom_33, retro_mdom_992,
Mustela putorius furo ENSMPUG00000006966 possible_ortholog 2 retrogenes
retro_mputfur_1444, retro_mputfur_924,
Mus musculus ENSMUSG00000028568 ortholog_one2many 2 retrogenes
retro_mmus_1134, retro_mmus_2743,
Oryctolagus cuniculus ENSOCUG00000001517 possible_ortholog 3 retrogenes
retro_ocun_1001, retro_ocun_1412, retro_ocun_1912,
Otolemur garnettii ENSOGAG00000013918 within_species_paralog 1 retrogene
retro_ogar_46,
Ochotona princeps ENSOPRG00000013335 possible_ortholog 2 retrogenes
retro_opri_719, retro_opri_974,
Procavia capensis ENSPCAG00000006428 ortholog_one2many 3 retrogenes
retro_pcap_129, retro_pcap_307, retro_pcap_373,
Pongo abelii ENSPPYG00000001353 possible_ortholog 2 retrogenes
retro_pabe_1850, retro_pabe_3010,
Rattus norvegicus ENSRNOG00000008512 ortholog_one2many 8 retrogenes
retro_rnor_1113, retro_rnor_1666, retro_rnor_1870, retro_rnor_1871, retro_rnor_1872, retro_rnor_537, retro_rnor_760, retro_rnor_998,
Sorex araneus ENSSARG00000003173 possible_ortholog 2 retrogenes
retro_sara_680, retro_sara_690,
Ictidomys tridecemlineatus ENSSTOG00000006129 possible_ortholog 6 retrogenes
retro_itri_1309, retro_itri_402, retro_itri_459, retro_itri_541, retro_itri_701, retro_itri_810,
Tarsius syrichta ENSTSYG00000013635 possible_ortholog 3 retrogenes
retro_tsyr_1576, retro_tsyr_1822, retro_tsyr_2045,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_570 57.14 100.00
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2. retro_ogar_2759 78.66 97.62
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Download FASTA sequences of all ENSOGAG00000030256 retrocopies