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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000100
species: Arachis duranensis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGGGGACAGGCAGAGCATGA

miRNA*
 ATGCACTGCCTCTTCCCTGGCT

mismatches: 2
bulges: 1
View larger
pre-miRNA
 CTAGCCAGAGAGAAAGAGAAGAGATGACAAAGACTGGGGACAGGCAGAGCATGAATGGAACTATCAATAGACACATTTGTTCACTGAGTTACAAAGGGAAA
CACACACATATACATACATAGATAAAGGCATGATACATCCATCATCTCATCTATTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCGTTCTT
TTTCCTTCTTTATTTATC

dot-bracket secondary structure
).......((((((.((((((.(((((...((((((((((.((((((.((((((.((...(((.(((((((.((....))....((((........(((..
.....................................))).....))))))))))))))...)).)))))).))))))..))))))).))).))))).))
)))).)))))).......


SIMILARITIES
miRBase ahy-MIR408: 2.0E-22

PMRD gma-miR408a: 5.0E-11

microPC miR408: 5.0E-14		UniProt no hits

RFAM 8MIR408: 6.0E-14		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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