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Species belonging to selected taxon:

Cycas rumphii, Zamia vazquezii



ABOUT THIS RECORD

ID: MNEST002837
species: Zamia vazquezii
miRNA family: MIR535
source: miRNEST

Taxonomy by NCBI:
Zamia vazquezii Zamia Zamiaceae Cycadales Cycadopsida Cycadophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAACGAGAGAGAGCACGC

miRNA*
 GTTCTCCCTCCCGTTGCCATC

mismatches: 4
bulges: 0
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pre-miRNA
 AGTTGTATGGAGTGACAACGAGAGAGAGCACGCTTGTCAGCATGTATGTAAAGCACATCAGTGTTTACAGGCGTTCTCCCTCCCGTTGCCATCCCGCCTGA


dot-bracket secondary structure
)......(((.(((.(((((.(((.(((.((((((((.(((((..((((.....))))..))))).)))))))).))).))).))))).))).))).....



SIMILARITIES
miRBase vvi-MIR535b: 2.0E-8

PMRD vvi-miR535c: 2.0E-8

microPC miR535: 3.0E-7		UniProt no hits

RFAM 5MIR535: 6.0E-9		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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