ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-72
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGCAGAGGCTGGCAGATCTC miRNA* GATCTGCCTCTTTTTGCAGGG mismatches: 4 bulges: 0 |
pre-miRNA
TGAACTTACAGAGATCTGCCTCTTTTTGCAGGGCTCTAAGGTTTGTATCATTGTCTTTGGCCAAACACTGATATTAATGCTCTTTAAAGGAAGAGAGGAG
ATTTGCGTGGTGATGGCACACACTTTTAATGCCAGCACTCATGAGGCAGAGGCTGGCAGATCTCTGTGAATTT
dot-bracket secondary structure
.(((.(((((((((((((((..(((((((.((.((((...(((.((((((.(((..........))).)))))).))).((((((....)))))).))))
..)).(((((((.(((((...........))))).))).))))..)))))))..))))))))))))))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TGAACTTACAGAGATCTGCCTCTTTTTGCAGGGCTCTAAGGTTTGTATCATTGTCTTTGGCCAAACACTGATATTAATGCTCTTTAAAGGAAGAGAGGAG
ATTTGCGTGGTGATGGCACACACTTTTAATGCCAGCACTCATGAGGCAGAGGCTGGCAGATCTCTGTGAATTT
dot-bracket secondary structure
.(((.(((((((((((((((..(((((((.((.((((...(((.((((((.(((..........))).)))))).))).((((((....)))))).))))
..)).(((((((.(((((...........))))).))).))))..)))))))..))))))))))))))).)))
SIMILARITIES| miRBase mmu-mir-3470a: 0.0000000006 PMRD no hits microPC no hits | UniProt no hits RFAM Metazoa_SRP: 0.0006 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
