ABOUT THIS RECORDspecies: Elaeis guineensis
miRNA family: MIR528
source: miRNEST
Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAAGGGGCATGCAGAGGAG miRNA* CCTGTGCTTGCCTCCTCCACC mismatches: 3 bulges: 0 |
pre-miRNA
ATCGGGAAGTAGCAGTAGCGGTGGAAGGGGCATGCAGAGGAGAGGTCAAGATGGANNGAAAGAAAGCGATATTTTTCATCTCAGTGCTTCTTCTGGTGGC
AAATTCCTGTGCTTGCCTCCTCCACCCCTGCTGCTACCACTCCC
dot-bracket secondary structure
...((((.((((((((((.((((((.((((((.(((.(((((..((((...((((..((.....((((................)))))).)))).))))
...))))).))).)))))).)))))).))))))))))...))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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ATCGGGAAGTAGCAGTAGCGGTGGAAGGGGCATGCAGAGGAGAGGTCAAGATGGANNGAAAGAAAGCGATATTTTTCATCTCAGTGCTTCTTCTGGTGGC
AAATTCCTGTGCTTGCCTCCTCCACCCCTGCTGCTACCACTCCC
dot-bracket secondary structure
...((((.((((((((((.((((((.((((((.(((.(((((..((((...((((..((.....((((................)))))).)))).))))
...))))).))).)))))).)))))).))))))))))...))))
SIMILARITIES| miRBase bdi-MIR528: 0.000000007 PMRD osa-miR528: 0.00003 microPC miR528: 5e-50 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR528 from microPC (MNEST046295) |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
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