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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000552
species: Elaeis guineensis
miRNA family: MIR528
source: miRNEST

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAAGGGGCATGCAGAGGAG

miRNA*
CCTGTGCTTGCCTCCTCCACC

mismatches: 3
bulges: 0

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pre-miRNA
ATCGGGAAGTAGCAGTAGCGGTGGAAGGGGCATGCAGAGGAGAGGTCAAGATGGANNGAAAGAAAGCGATATTTTTCATCTCAGTGCTTCTTCTGGTGGC
AAATTCCTGTGCTTGCCTCCTCCACCCCTGCTGCTACCACTCCC


dot-bracket secondary structure
...((((.((((((((((.((((((.((((((.(((.(((((..((((...((((..((.....((((................)))))).)))).))))
...))))).))).)))))).)))))).))))))))))...))))



SIMILARITIES
miRBase bdi-MIR528: 0.000000007

PMRD osa-miR528: 0.00003

microPC miR528: 5e-50
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR528 from microPC (MNEST046295)

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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