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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000552
species: Elaeis guineensis
miRNA family: MIR528
source: miRNEST

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAAGGGGCATGCAGAGGAG

miRNA*
CCTGTGCTTGCCTCCTCCACC

mismatches: 3
bulges: 0

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pre-miRNA
ATCGGGAAGTAGCAGTAGCGGTGGAAGGGGCATGCAGAGGAGAGGTCAAGATGGANNGAAAGAAAGCGATATTTTTCATCTCAGTGCTTCTTCTGGTGGC
AAATTCCTGTGCTTGCCTCCTCCACCCCTGCTGCTACCACTCCC


dot-bracket secondary structure
...((((.((((((((((.((((((.((((((.(((.(((((..((((...((((..((.....((((................)))))).)))).))))
...))))).))).)))))).)))))).))))))))))...))))



SIMILARITIES
miRBase bdi-MIR528: 0.000000007

PMRD osa-miR528: 0.00003

microPC miR528: 5e-50
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR528 from microPC (MNEST046295)

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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