ABOUT THIS RECORDspecies: Caenorhabditis elegans
miRNA family: miR-1747
source: miRNEST
Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAACTTGAATGGAGTTCCGC miRNA* GGAACTCCGCGTGGTCCATA mismatches: 4 bulges: 1 |
pre-miRNA
GGTGGAACTCCGCGTGGTCCATAGCCAAGATCGGCAGAGATGGTGAGCTTCNACTTCTCACCAACTGACATCTGGGCGACTCCTTGGTCCCATCCCTTGA
TGACCTCTCCCTTTCCAATCTTGAACTTGAATGGAGTTCCGC
dot-bracket secondary structure
.(((((((((((...(((.((.......((..((.((((.(((((((.........))))))).....((((.(((.((((....))))....)))..))
))..)))).))..))......)).)))....)))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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GGTGGAACTCCGCGTGGTCCATAGCCAAGATCGGCAGAGATGGTGAGCTTCNACTTCTCACCAACTGACATCTGGGCGACTCCTTGGTCCCATCCCTTGA
TGACCTCTCCCTTTCCAATCTTGAACTTGAATGGAGTTCCGC
dot-bracket secondary structure
.(((((((((((...(((.((.......((..((.((((.(((((((.........))))))).....((((.(((.((((....))))....)))..))
))..)))).))..))......)).)))....)))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q554J3|FKBP1_DICDI: 0.000000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
