miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Caenorhabditis remanei



ABOUT THIS RECORD

ID: MNEST006900
species: Caenorhabditis elegans
miRNA family: miR-1747
source: miRNEST

Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAACTTGAATGGAGTTCCGC

miRNA*
GGAACTCCGCGTGGTCCATA

mismatches: 4
bulges: 1

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pre-miRNA
GGTGGAACTCCGCGTGGTCCATAGCCAAGATCGGCAGAGATGGTGAGCTTCNACTTCTCACCAACTGACATCTGGGCGACTCCTTGGTCCCATCCCTTGA
TGACCTCTCCCTTTCCAATCTTGAACTTGAATGGAGTTCCGC


dot-bracket secondary structure
.(((((((((((...(((.((.......((..((.((((.(((((((.........))))))).....((((.(((.((((....))))....)))..))
))..)))).))..))......)).)))....)))))))))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q554J3|FKBP1_DICDI: 0.000000000003

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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