ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: miR-2954
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTGAGTGGGCTTGGGGACAG miRNA* CTCCCTGGGCCTCGCCTGCTT mismatches: 3 bulges: 2 |
pre-miRNA
GTGGACACGGAGCTGAGTGGGCTTGGGGACAGGAAGAGTTTGCTGAACCAGTGCATCGAGGAACGTTACAAGGCTGTGTGTCATGCTGCCAGGACCCGTT
CTATCCTCTCCCTGGGCCTCGCCTGCTTCAAGCGAC
dot-bracket secondary structure
........(((((...(((((((((((((.((((.((...(((((...)))))..))..((((((......(((...((.....)).)))......))))
)).)))).)))))))))).)))..))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GTGGACACGGAGCTGAGTGGGCTTGGGGACAGGAAGAGTTTGCTGAACCAGTGCATCGAGGAACGTTACAAGGCTGTGTGTCATGCTGCCAGGACCCGTT
CTATCCTCTCCCTGGGCCTCGCCTGCTTCAAGCGAC
dot-bracket secondary structure
........(((((...(((((((((((((.((((.((...(((((...)))))..))..((((((......(((...((.....)).)))......))))
)).)))).)))))))))).)))..))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q96GM8|TOE1_HUMAN: 5e-19 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
