miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Homo sapiens, Pongo abelii, Macaca nemestrina, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007561
species: Macaca fascicularis
miRNA family: miR-2954
source: miRNEST

Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGAGTGGGCTTGGGGACAG

miRNA*
CTCCCTGGGCCTCGCCTGCTT

mismatches: 3
bulges: 2

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pre-miRNA
GTGGACACGGAGCTGAGTGGGCTTGGGGACAGGAAGAGTTTGCTGAACCAGTGCATCGAGGAACGTTACAAGGCTGTGTGTCATGCTGCCAGGACCCGTT
CTATCCTCTCCCTGGGCCTCGCCTGCTTCAAGCGAC


dot-bracket secondary structure
........(((((...(((((((((((((.((((.((...(((((...)))))..))..((((((......(((...((.....)).)))......))))
)).)))).)))))))))).)))..))))).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q96GM8|TOE1_HUMAN: 5e-19

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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