miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Peromyscus polionotus subgriseus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007561
species: Macaca fascicularis
miRNA family: miR-2954
source: miRNEST

Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGAGTGGGCTTGGGGACAG

miRNA*
CTCCCTGGGCCTCGCCTGCTT

mismatches: 3
bulges: 2

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pre-miRNA
GTGGACACGGAGCTGAGTGGGCTTGGGGACAGGAAGAGTTTGCTGAACCAGTGCATCGAGGAACGTTACAAGGCTGTGTGTCATGCTGCCAGGACCCGTT
CTATCCTCTCCCTGGGCCTCGCCTGCTTCAAGCGAC


dot-bracket secondary structure
........(((((...(((((((((((((.((((.((...(((((...)))))..))..((((((......(((...((.....)).)))......))))
)).)))).)))))))))).)))..))))).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q96GM8|TOE1_HUMAN: 5e-19

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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