ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR408
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGGGGACAGGCAGAGCATGA miRNA* ATGCACTGCCTCTTCCCTGGCT mismatches: 2 bulges: 1 |
pre-miRNA
CTAGCCAGAGAGAAAGAGAAGAGATGACAAAGACTGGGGACAGGCAGAGCATGAATGGAACTATCAATAGACACATTTGTTCACTGAGTTACAAAGGGAAA
CACACACATATACATACATAGATAAAGGCATGATACATCCATCATCTCATCTATTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCGTTCTT
TTTCCTTCTTTATTTATC
dot-bracket secondary structure
).......((((((.((((((.(((((...((((((((((.((((((.((((((.((...(((.(((((((.((....))....((((........(((..
.....................................))).....))))))))))))))...)).)))))).))))))..))))))).))).))))).))
)))).)))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
CTAGCCAGAGAGAAAGAGAAGAGATGACAAAGACTGGGGACAGGCAGAGCATGAATGGAACTATCAATAGACACATTTGTTCACTGAGTTACAAAGGGAAA
CACACACATATACATACATAGATAAAGGCATGATACATCCATCATCTCATCTATTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCGTTCTT
TTTCCTTCTTTATTTATC
dot-bracket secondary structure
).......((((((.((((((.(((((...((((((((((.((((((.((((((.((...(((.(((((((.((....))....((((........(((..
.....................................))).....))))))))))))))...)).)))))).))))))..))))))).))).))))).))
)))).)))))).......
SIMILARITIES| miRBase ahy-MIR408: 2.0E-22 PMRD gma-miR408a: 5.0E-11 microPC miR408: 5.0E-14 | UniProt no hits RFAM 8MIR408: 6.0E-14 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
