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ABOUT THIS RECORD
ID:
MNEST000955
species:
Hordeum vulgare
miRNA family:
MIRf719
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GATTTGTCCACGTCATCACAA
miRNA*
TGATGATGTGGACAAATTCC
mismatches:
2
bulges:
0
View larger
pre-miRNA
ATATATATTAGAAATTTAGAAACTACTGTTAGATAAAAAAAGGACGTTCGA
GATTTGTCCACGTCATCACAA
GTAAAAAGTTTACTCATGGATTTATTGA
TGAGTCACGGTGAAATTTTTACTA
TGATGATGTGGACAAATTCC
GAACATCCATTTTCGATCCAATAGATGTTTCAAGTTTGTACCATATAT
dot-bracket secondary structure
((((((..((.((((((.(((((..(((((.(((..((((.(((.(((((.
((((((((((((((((((..(
(((((((.((((((....((((((....
))))))..)))))).)))))))).
)))))))))))))))))).)
)))).))).))))..))).)))))..))))))))))).))..))))))
SIMILARITIES
miRBase
osa-MIR2862
:
0.0000002
PMRD
osa-miRf11197-akr
:
0.0000000000002
microPC
no hits
UniProt
no hits
RFAM
MIR811: 0.00000000000005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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