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ABOUT THIS RECORD

ID: MNEST003614
species: Zea mays
miRNA family: miR169o
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGCAGGTCTTCTTGGCTAGCC

miRNA*
 TAGCCAAGAATGACTTGCCTA

mismatches: 0
bulges: 2
View larger
pre-miRNA
 ACACNTTACGCCACAGAACTTGCAGGCATGGCTGAAGGTTAAGAAGAAAAAGAGGAGGGCGGCCTCACATGGAGATGGAGAGCCCCTTTTGGTAGCCAAG
AATGACTTGCCTATGCACGCCCTCTGTTGGCAGTTCCGTCCGGCAGCCATGGCGACGGTTGCACAAGGTGAGTTTTTGCGGCGTGGAGGATGCAATGCGG
CTGCATCGGCAGGTCTTCTTGGCTAGCCAGAGGGCTCTCGTCCACCATGCCAGGCCTCCCTCTTCAAAATTTCCCTGATTTTTGCCCTCTGCACATGGAA
CTTGGTGATTAAACTTT

dot-bracket secondary structure
........(((((.((..((((((((...(((.((((((((.((((.....((((((((.(((((..(((((.((((.(((((((..(((((((((((((
((.((((((((.(((((.(((...(((((.((..(((.((((...(((.(((.(((...(((.....))).))).))).))).)))))))))))))).))
)))))).)))))))))))))))))).))))))))))))))))..)))))..))))).))))))))....))))..))))))))))).))))))...))..
)))))))..........


SIMILARITIES
miRBase zma-MIR169o: 2e-69

PMRD sbi-miR169i: 4e-34

microPC no hits		UniProt no hits

RFAM MIR169_5: 4e-93		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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