ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGTACAAAGATGAGTCATCT miRNA* ATGACTCAACTTTATACTAAC mismatches: 3 bulges: 0 |
pre-miRNA
AAGCTTAAATGTACTCCCTCCGTTCCAAGATAAATGACTCAACTTTATACTAACTTTAACATAAACTTAGTACAAAGATGAGTCATCTATTTAAAACGGAG
GAAGTATGAGGGAGTA
dot-bracket secondary structure
).((((...((((((.((((((((...(((((.((((((((.((((.((((((.((((...)))).)))))).)))).)))))))).)))))..)))))))
).))))))...)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAGCTTAAATGTACTCCCTCCGTTCCAAGATAAATGACTCAACTTTATACTAACTTTAACATAAACTTAGTACAAAGATGAGTCATCTATTTAAAACGGAG
GAAGTATGAGGGAGTA
dot-bracket secondary structure
).((((...((((((.((((((((...(((((.((((((((.((((.((((((.((((...)))).)))))).)))).)))))))).)))))..)))))))
).))))))...)))).
SIMILARITIES| miRBase tae-MIR1137: 1.0E-10 PMRD ata-miR1120: 4.0E-13 microPC miR1137: 7.0E-24 | UniProt no hits RFAM 2MIR1122: 3.0E-23 | most similar mature miRNAs |
Identical with: miR1137 from microPC (MNEST046385) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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