miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST005800
species: Triticum aestivum
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGTACAAAGATGAGTCATCT

miRNA*
ATGACTCAACTTTATACTAAC

mismatches: 3
bulges: 0

View larger
pre-miRNA
AGCTTAAATGTACTCCCTCCGTTCCAAGATAAATGACTCAACTTTATACTAACTTTAACATAAACTTAGTACAAAGATGAGTCATCTATTTAAAACGGAG
GAAGTATGAGGGAGTA


dot-bracket secondary structure
.((((...((((((.((((((((...(((((.((((((((.((((.((((((.((((...)))).)))))).)))).)))))))).)))))..)))))))
).))))))...)))).



SIMILARITIES
miRBase tae-MIR1137: 0.0000000001

PMRD ata-miR1120: 0.0000000000004

microPC miR1137: 7e-24
UniProt no hits

RFAM MIR1122: 3e-23
most similar mature miRNAs

Identical with: miR1137 from microPC (MNEST046385)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;