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ABOUT THIS RECORD

ID: MNEST007388
species: Solanum tuberosum
miRNA family: MIR399
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGAGCTGCCCTG

miRNA*
 GGGCTACTCTCTATTGGCATG

mismatches: 3
bulges: 0
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pre-miRNA
 TAATTTATAAGGGAAACAGTGGTAGGGCTACTCTCTATTGGCATGCAGTGATATATTTAAGCTGACATGCCAAAGGAGAGCTGCCCTGTTACTGTCTCTGT
TTAGTGT

dot-bracket secondary structure
)..........(((.(((((((((((((..((((((.((((((((((((...........)))).)))))))).))))))..))))))))))))).)))..
.......


SIMILARITIES
miRBase sly-MIR399: 3.0E-7

PMRD sly-miR399: 3.0E-7

microPC miR399: 1.0E-31		UniProt no hits

RFAM 9mir-399: 9.0E-5		most similar mature miRNAs

Identical with: miR399 from microPC (MNEST046131)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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