miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST007388
species: Solanum tuberosum
miRNA family: MIR399
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGAGCTGCCCTG

miRNA*
 GGGCTACTCTCTATTGGCATG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AATTTATAAGGGAAACAGTGGTAGGGCTACTCTCTATTGGCATGCAGTGATATATTTAAGCTGACATGCCAAAGGAGAGCTGCCCTGTTACTGTCTCTGT
TTAGTGT

dot-bracket secondary structure
..........(((.(((((((((((((..((((((.((((((((((((...........)))).)))))))).))))))..))))))))))))).)))..
.......


SIMILARITIES
miRBase sly-MIR399: 0.0000003

PMRD sly-miR399: 0.0000003

microPC miR399: 1e-31		UniProt no hits

RFAM mir-399: 0.00009		most similar mature miRNAs

Identical with: miR399 from microPC (MNEST046131)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;