miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST009504
species: Trichinella spiralis
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Trichinella spiralis Trichinella Trichinellidae Trichocephalida Enoplia Enoplea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTGCTGCTGCTGTTGCTGCT

miRNA*
 TCAGCAACAGTTCCAGTGGCAG

mismatches: 2
bulges: 1
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pre-miRNA
 CCGCTGCTTTTGCTGCTGCTGCTGTTGCTGCTGCTCTTTTGCCATTTCTCTTCACACGCTTTCCATTCTCCCAGGCAAAATACAATTTGATGAACACGTT
TGTTGATCAAAAAGAAGAAGTGATTTTTTCAAAAAGCCGGTCAGCAACAGTTCCAGTGGCAGATCAGATT

dot-bracket secondary structure
...(((..((((((((((..(((((((((((((((.(((((((..............................))))))).....((((((.((((....
)))).))))))..((((((.....))))))....)).))).))))))))))..)))))))))).)))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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