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ABOUT THIS RECORD

ID: MNEST045978
species: Brassica rapa
source: microPC, original name: miR156

Taxonomy by NCBI:
Brassica rapa Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGAAGATAGAGAGCAC

miRNA*
 GCTCTCTATACTTCTG

mismatches: 0
bulges: 1
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pre-miRNA
 CAGAAGATAGAGAGCACTAAGGATGACATGCAAGTACATACATATATATCATCACACCGCAAGTGGATATAAGGAAATTCAAGAAAGAGAGGAAAAAAGA
GCCTGCATCTCTACTCTTTTGTGCTCTCTATACTTCTG

dot-bracket secondary structure
(((((((((((((((((.(((((.((.(((((.((.(.......((((((..(((.......)))))))))......(((......))).........).
)).))))).))...))))).))))))))))).))))))


SIMILARITIES
miRBase bna-MIR156c: 6e-34

PMRD bna-miR156c: 6e-34

microPC miR157: 2e-74		UniProt no hits

RFAM no hits

Identical with: miR157 from microPC (MNEST046632)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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