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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST045978
species:
Brassica rapa
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Brassica rapa
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGAAGATAGAGAGCAC
miRNA*
GCTCTCTATACTTCTG
mismatches:
0
bulges:
1
View larger
pre-miRNA
CAGAAGATAGAGAGCAC
TAAGGATGACATGCAAGTACATACATATATATCATCACACCGCAAGTGGATATAAGGAAATTCAAGAAAGAGAGGAAAAAAGA
GCCTGCATCTCTACTCTTTTGT
GCTCTCTATACTTCTG
dot-bracket secondary structure
(((((((((((((((((
.(((((.((.(((((.((.(.......((((((..(((.......)))))))))......(((......))).........).
)).))))).))...))))).))
))))))))).))))))
SIMILARITIES
miRBase
bna-MIR156c
:
6e-34
PMRD
bna-miR156c
:
6e-34
microPC
miR157
:
2e-74
UniProt
no hits
RFAM
no hits
Identical with:
miR157
from microPC (
MNEST046632
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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