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Species belonging to selected taxon:
Apis mellifera
ABOUT THIS RECORD
ID:
MNEST035382
species:
Apis mellifera
miRNA family:
mir-278
source:
miRBase, original name:
ame-mir-278
(
MI0001586
)
Taxonomy by NCBI:
Apis mellifera
Apis
Apini
Apinae
Apidae
Apoidea
Aculeata
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGGTGGGACTTTCGTCCGTTT
miRNA*
CCGGATGAGGTCTTCATCGACC
mismatches:
2
bulges:
2
View larger
pre-miRNA
TCACGAGTAGTGTGT
CCGGATGAGGTCTTCATCGACC
GTGATTTAATTTCATAAGG
TCGGTGGGACTTTCGTCCGTTT
GCAAGACTCGAGGA
dot-bracket secondary structure
...(((((..((((.
.((((((((((((.((((((((
((((.......))))..))
)))))))))).))))))))..)
)))..)))))....
SIMILARITIES
miRBase
aga-mir-278
:
0.00000007
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-278: 5e-46
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
RTPCR
references
[
1
] Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG,
Genome Biol. 8:R97(2007).
,
"Computational and transcriptional evidence for microRNAs in the honey bee genome"