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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000348
species: Cichorium intybus
miRNA family: MIRf654
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGGTGGAGAAGCAGGGCACG

miRNA*
TGCCCATCTTCCCCATCATGA

mismatches: 4
bulges: 0

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pre-miRNA
GTTTGAACCCAACATGGTGTGTGGTGAGCAAGGTGGAGAAGCAGGGCACGTGTATTACTAACTCATCATTGCACCATCATGAAAATGTCTGGACGACATC
ATGAAGCCAACAAGGTACCTGGTGAGGTCACTGGTTCGAGGTTTCGGGACCTGGGTTCAGTGAGTAATCTCGAGCCAAAAGCTCATGGTTCTTGAAATGA
GTTAGTGTTCCATGTGCCCATCTTCCCCATCATGAACACACATACATTAATTTGCGGCAGA


dot-bracket secondary structure
.......(((((..((((((((((((..((.(((((.((((..(((((((((...(((((((((((((....((((((((((...((((.....))))))
)))).((((..........))))(((((((((((.((.(((((....))))).)).)))))))....))))((((.....)))).))))...)))..)))
)))))))...)))))))))..)))).))))).))..))).)))))))))..))).))....



SIMILARITIES
miRBase ptc-MIR164e: 0.0000000000009

PMRD ptc-miRf11320-akr: 0.0000000000009

microPC miR164: 8e-109
UniProt no hits

RFAM MIR164: 0.00000000002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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