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Species belonging to selected taxon:

Cichorium intybus, Cichorium endivia



ABOUT THIS RECORD

ID: MNEST000348
species: Cichorium intybus
miRNA family: MIRf654
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGGTGGAGAAGCAGGGCACG

miRNA*
TGCCCATCTTCCCCATCATGA

mismatches: 4
bulges: 0

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pre-miRNA
GTTTGAACCCAACATGGTGTGTGGTGAGCAAGGTGGAGAAGCAGGGCACGTGTATTACTAACTCATCATTGCACCATCATGAAAATGTCTGGACGACATC
ATGAAGCCAACAAGGTACCTGGTGAGGTCACTGGTTCGAGGTTTCGGGACCTGGGTTCAGTGAGTAATCTCGAGCCAAAAGCTCATGGTTCTTGAAATGA
GTTAGTGTTCCATGTGCCCATCTTCCCCATCATGAACACACATACATTAATTTGCGGCAGA


dot-bracket secondary structure
.......(((((..((((((((((((..((.(((((.((((..(((((((((...(((((((((((((....((((((((((...((((.....))))))
)))).((((..........))))(((((((((((.((.(((((....))))).)).)))))))....))))((((.....)))).))))...)))..)))
)))))))...)))))))))..)))).))))).))..))).)))))))))..))).))....



SIMILARITIES
miRBase ptc-MIR164e: 0.0000000000009

PMRD ptc-miRf11320-akr: 0.0000000000009

microPC miR164: 8e-109
UniProt no hits

RFAM MIR164: 0.00000000002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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