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Species belonging to selected taxon:
Guizotia abyssinica
,
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Parthenium argentatum
,
Zinnia violacea
,
Artemisia annua
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST045111
species:
Helianthus tuberosus
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Helianthus tuberosus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTC
miRNA*
GCTCCTTAAAGTCCAATAG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GA
GCTCCTTAAAGTCCAATAG
AAGATCTGAGTGAGAACATAGAGCTGCTAGTTTATGGATCCCTCAAGTCCTATCTTTGTTGATGTATAGGCTTTGTGGC
TTGCATACACTTGGAGCTTTATTACCCTCCTTATGATCCTTT
TTTGGATTGAAGGGAGCTC
dot-bracket secondary structure
((
(((((((..(((((((.((
(.((((((((.(((...((((((((.(.(((.((((.(..((.((((.((((((.........).))))).)))).)).
.).)))).))).).))))))))....))))))).)))).)))
.)))))))..)))))))))
SIMILARITIES
miRBase
sly-MIR159
:
0.000002
PMRD
sly-miR159
:
0.000002
microPC
miR319
:
4e-88
UniProt
no hits
RFAM
MIR159: 0.00004
Identical with:
miR159
from microPC (
MNEST045888
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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