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Species belonging to selected taxon:
Caligus rogercresseyi
,
Caligus clemensi
ABOUT THIS RECORD
ID:
MNEST009767
species:
Caligus clemensi
miRNA family:
mir-993
source:
miRNEST
Taxonomy by NCBI:
Caligus clemensi
Caligus
Caligidae
Siphonostomatoida
Podoplea
Neocopepoda
Copepoda
Maxillopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAAGCTCGACTCTACAGGTAT
miRNA*
ACCCTGTTGATCCGGGCTTTTG
mismatches:
4
bulges:
1
View larger
pre-miRNA
TAGAAACCCCATACGTATTCT
ACCCTGTTGATCCGGGCTTTTG
TAGAATTTTAAACCTATCGACATTCGTTGGAAAACAATTTCGATTGTTTCA
GAAGCT
CGACTCTACAGGTAT
CGTACTGTATGGTTAGAA
dot-bracket secondary structure
........((((((((((..(
(((.(((.((..((((((((((
.........((((..(((((.(((.(((....)))))).))))).))))))
))))))
))..)).))))))).
.)))).))))))......
SIMILARITIES
miRBase
tca-mir-993
:
0.0000000004
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record