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Species belonging to selected taxon:
Carica papaya
ABOUT THIS RECORD
ID:
MNEST045151
species:
Carica papaya
source:
microPC, original name:
miR390
Taxonomy by NCBI:
Carica papaya
Carica
Caricaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCTCAGGAGGGATAGCGCC
miRNA*
CGCTATCCATCCTGAGTT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGCTCAGGAGGGATAGCGCC
ATGGCGGGTCTTGAATCTTGATCTTCATTTG
CGCTATCCATCCTGAGTT
dot-bracket secondary structure
(((((((((.(((((((((.
((((.(((((.........)))))))))..)
)))))))).)))))))))
SIMILARITIES
miRBase
gma-MIR390a
:
0.00000005
PMRD
ath-miR390b
:
0.0000002
microPC
miR390
:
1e-33
UniProt
no hits
RFAM
MIR390: 2e-32
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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