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Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Anopheles stephensi, Polypedilum vanderplanki



ABOUT THIS RECORD

ID: MNEST008508
species: Culex quinquefasciatus
miRNA family: miR-285
source: miRNEST

Taxonomy by NCBI:
Culex quinquefasciatus Culex pipiens complex Culex Culex Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTGGCTTCCAAAGGTGAGTA

miRNA*
 GCACCATTCGAAATCAGTAC

mismatches: 4
bulges: 1
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pre-miRNA
 CAACTCAAAATCTCAGCAAGTACTGGCTTCCAAAGGTGAGTAGATGGCATTCGATATCGCTCTAGCACCATTCGAAATCAGTACCTGGTGGATTAGTCCT
GG

dot-bracket secondary structure
........((((.((.((.(((((((.(((.((.((((..((((..((..........)))))).)))).)).))).))))))).)).))))))......
..


SIMILARITIES
miRBase cqu-mir-285: 3e-32

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: cqu-mir-285 from miRBase (MNEST036040)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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