miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Drosophila simulans, Glossina morsitans morsitans, Phlebotomus papatasi, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Lutzomyia longipalpis, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Cochliomyia hominivorax, Anopheles stephensi, Haematobia irritans irritans, Polypedilum vanderplanki, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST008508
species: Culex quinquefasciatus
miRNA family: miR-285
source: miRNEST

Taxonomy by NCBI:
Culex quinquefasciatus Culex pipiens complex Culex Culex Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTGGCTTCCAAAGGTGAGTA

miRNA*
 GCACCATTCGAAATCAGTAC

mismatches: 4
bulges: 1
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pre-miRNA
 CAACTCAAAATCTCAGCAAGTACTGGCTTCCAAAGGTGAGTAGATGGCATTCGATATCGCTCTAGCACCATTCGAAATCAGTACCTGGTGGATTAGTCCT
GG

dot-bracket secondary structure
........((((.((.((.(((((((.(((.((.((((..((((..((..........)))))).)))).)).))).))))))).)).))))))......
..


SIMILARITIES
miRBase cqu-mir-285: 3e-32

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: cqu-mir-285 from miRBase (MNEST036040)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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