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Species belonging to selected taxon:
Oryzias latipes
,
Salmo salar
,
Oncorhynchus mykiss
,
Gasterosteus aculeatus
,
Gadus morhua
,
Oreochromis niloticus
,
Fundulus heteroclitus
,
Sparus aurata
,
Dicentrarchus labrax
,
Dissostichus mawsoni
,
Osmerus mordax
,
Anoplopoma fimbria
,
Esox lucius
,
Takifugu rubripes
,
Sebastes caurinus
,
Perca flavescens
,
Paralabidochromis chilotes
,
Hippoglossus hippoglossus
,
Poecilia reticulata
,
Oncorhynchus tshawytscha
,
Paralichthys olivaceus
,
Psetta maxima
,
Lates calcarifer
,
Oncorhynchus nerka
,
Sebastes rastrelliger
,
Thymallus thymallus
,
Solea senegalensis
,
Coregonus clupeaformis
,
Thunnus thynnus
,
Cynoglossus semilaevis
,
Salvelinus fontinalis
ABOUT THIS RECORD
ID:
MNEST006864
species:
Salmo salar
miRNA family:
mir-96
source:
miRNEST
Taxonomy by NCBI:
Salmo salar
Salmo
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGCACTAGCACAATTATC
miRNA*
AAATTGTGCTAGTGCCAAATT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TGTTAAGAAAA
TTTGGCACTAGCACAATTATC
TTTATTCTTTCAAAGTGTTAAGA
AAATTGTGCTAGTGCCAAATT
TTCAATGC
dot-bracket secondary structure
......(((((
((((((((((((((((((.((
((.((.(((...))).)).))))
.))))))))))))))))))))
))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record