miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST002754
species: Trifolium pratense
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCTGTCCCAAAATA

miRNA*
 TTTTGGGACAGAGAGAGTAAT

mismatches: 1
bulges: 0
View larger
pre-miRNA
 GCCTATTAAGTACTCCCTCTGTCCCAAAATATAAGCAAAAAGGGGTCAACAAAAGTGAATATATTTGGACTAAATTTTAAACCAAATTCATCAACTTTCG
TTGACCACATTTTGCTTATATTTTGGGACAGAGAGAGTAATATATTAT

dot-bracket secondary structure
..........(((((.((((((((((((((((((((((((...(((((((.(((((......((((((.............))))))......))))).)
))))))...)))))))))))))))))))))))).))))).........


SIMILARITIES
miRBase osa-MIR1862d: 0.00003

PMRD osa-miRf11090-akr: 0.0000005

microPC miR1439: 0.0001		UniProt no hits

RFAM MIR1122: 0.000000000000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;