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Species belonging to selected taxon:
Mus musculus
,
Rattus norvegicus
,
Peromyscus maniculatus bairdii
,
Oryctolagus cuniculus
,
Cavia porcellus
,
Peromyscus polionotus subgriseus
ABOUT THIS RECORD
ID:
MNEST009621
species:
Cavia porcellus
miRNA family:
miR-2137
source:
miRNEST
Taxonomy by NCBI:
Cavia porcellus
Cavia
Caviidae
Hystricognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCGGCGGGAGCCCCGGGGAC
miRNA*
CTCCGGTGAGCTCTCGCTGGCCC
mismatches:
3
bulges:
2
View larger
pre-miRNA
AACGCGACCGATCCCGGAAAA
GCCGGCGGGAGCCCCGGGGAC
AGTTCTCTTTTCTTTGTGAAGGGCAAGTCGCCCTGCAATGGATTCGCCCCCAGAGAGG
GGCCCGTGCCTTGGAAAGCGTCGCGGTTCCGGAGGC
CTCCGGTGAGCTCTCGCTGGCCC
TTGAAAATCCGGAGGACA
dot-bracket secondary structure
.......((....(((((...
((((((((((((.((((((..
(((((........((((..(((((.....))))))))).))))).(((((......))
)))....(((((((((.((...))..)))).)))))
))))))...))))))))))))..
.......))))).))...
SIMILARITIES
miRBase
bta-mir-2889
:
0.0001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record