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Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST048641
species: Helianthus annuus
source: PMRD, original name: han-miR156

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCAC

miRNA*
 GCTCCGCTTCTTCCCATCA

mismatches: 6
bulges: 3
View larger
pre-miRNA
 TGACAGAAGAGAGAGAGCACGGTATGCTTTTGCGTTGGAACATGCATACGAAAGTAACTAATCATACGATAAATTATCAAAACTACTGTCGATAGAGTAA
TTAGGAAAACAAACCTTGATGAAAAACACCGGCTGTGTGCTGGGAATTGCGTGTGGTTTCCCAAATAGAGTTCAAAGCAGGTTCGGGTTGAACCAGTTCA
GGAACATTGTTAGACACAAAACTTATTTGATGTTGCCCATCATAAAATGATGAAGACTGACTTCTTGAGTTAAAGTGGACAGTTTCTTTTTCTTTTTGTG
GCTTTCGGCGACGGGCATTGTGGTCAGAAAGCCTCTGGCGACAGCTCCGCTTCTTCCCATCA

dot-bracket secondary structure
.((..((((((.(.((((..((((.(.(((((.(((..((((....(((....)))...(((((((((.....((((((..(((.(((....))))))..
..(((........)))))))))......(((((.....)))))......)))))))))...........((((..(((.(((((.....))))).)))..
.))))..)))).))).)))))).))))...(((((((....((((((.((.((((((((.((.(((......))).)).)))..))))).)).))))))(
(((((((((.(((.....))).))).)))))))...))))))))))))..))))))...)).


SIMILARITIES
miRBase no hits

PMRD han-miR157b: 0

microPC no hits		UniProt sp|Q6H509|SPL4_ORYSJ: 0.000000001

RFAM no hits

Identical with: han-miR157b from PMRD (MNEST048643)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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