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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST048641
species: Helianthus annuus
source: PMRD, original name: han-miR156

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCAC

miRNA*
 GCTCCGCTTCTTCCCATCA

mismatches: 6
bulges: 3
View larger
pre-miRNA
 TGACAGAAGAGAGAGAGCACGGTATGCTTTTGCGTTGGAACATGCATACGAAAGTAACTAATCATACGATAAATTATCAAAACTACTGTCGATAGAGTAA
TTAGGAAAACAAACCTTGATGAAAAACACCGGCTGTGTGCTGGGAATTGCGTGTGGTTTCCCAAATAGAGTTCAAAGCAGGTTCGGGTTGAACCAGTTCA
GGAACATTGTTAGACACAAAACTTATTTGATGTTGCCCATCATAAAATGATGAAGACTGACTTCTTGAGTTAAAGTGGACAGTTTCTTTTTCTTTTTGTG
GCTTTCGGCGACGGGCATTGTGGTCAGAAAGCCTCTGGCGACAGCTCCGCTTCTTCCCATCA

dot-bracket secondary structure
.((..((((((.(.((((..((((.(.(((((.(((..((((....(((....)))...(((((((((.....((((((..(((.(((....))))))..
..(((........)))))))))......(((((.....)))))......)))))))))...........((((..(((.(((((.....))))).)))..
.))))..)))).))).)))))).))))...(((((((....((((((.((.((((((((.((.(((......))).)).)))..))))).)).))))))(
(((((((((.(((.....))).))).)))))))...))))))))))))..))))))...)).


SIMILARITIES
miRBase no hits

PMRD han-miR157b: 0

microPC no hits		UniProt sp|Q6H509|SPL4_ORYSJ: 0.000000001

RFAM no hits

Identical with: han-miR157b from PMRD (MNEST048643)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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