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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST054687
species: Triticum aestivum
source: PMRD, original name: tae-miR319b

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGAGTGAAGGGAGCTCCA

miRNA*
 CAGCTCTTCCAAGA

mismatches: 2
bulges: 6
View larger
pre-miRNA
 TGAAGCAGCTCTTCCAAGAGACCGCTGTTCCTTGGCGACACACACTCCGACTTCACTGACGGAGTTGCTGTCGGAGACTGAAGGTAGGGATCAACCAACT
CCGTAGGCTGCATCGCAGGAGCCACGGTATACTTGAGCCAGCTATTCGGATCAGATTCGGTATCTTGGAGTGAAGGGAGCTCCA

dot-bracket secondary structure
....(.(((((((((((((.(((((((.(((....(((((((.((((((.(......).)))))))).))))).........(((.((..((((......
((((.((((.(......).)))))))).....)))).)).)))....))).)))...)))).)))))))......)))))).).


SIMILARITIES
miRBase gma-MIR159b: 0.0006

PMRD sof-miR319c: 6e-47

microPC miR159: 0.0006		UniProt sp|Q0JIC2|GAM1_ORYSJ: 6e-27

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
degradome data
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