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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST005898
species: Triticum aestivum
miRNA family: MIR1171
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGTGGAGTGGAGTGGAGT

miRNA*
 TANGCGACCATCTGCTCCAGG

mismatches: 3
bulges: 2
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pre-miRNA
 TCCTTATATACTGGAGTGGAGTGGAGTGGAGTAGTATTTCTTAATTTCTTCTTCAGCTACAAAAACTGTAACGAAAATGTGAATTANTTAACTANGCGAC
CATCTGCTCCAGGTCCGACCA

dot-bracket secondary structure
..........((((((((((.(((.((..((((.((.(((.((.((((.....(((.........)))....)))).)).))).))..).)))..))..)
)))))))))))).........


SIMILARITIES
miRBase cre-MIR1171: 0.00009

PMRD cre-miR1171: 0.00009

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
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