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Species belonging to selected taxon:
Agrostis stolonifera
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST005898
species:
Triticum aestivum
miRNA family:
MIR1171
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGAGTGGAGTGGAGTGGAGT
miRNA*
TANGCGACCATCTGCTCCAGG
mismatches:
3
bulges:
2
View larger
pre-miRNA
TCCTTATATAC
TGGAGTGGAGTGGAGTGGAGT
AGTATTTCTTAATTTCTTCTTCAGCTACAAAAACTGTAACGAAAATGTGAATTANTTAAC
TANGCGAC
CATCTGCTCCAGG
TCCGACCA
dot-bracket secondary structure
..........(
(((((((((.(((.((..(((
(.((.(((.((.((((.....(((.........)))....)))).)).))).))..).))
)..))..)
)))))))))))).
........
SIMILARITIES
miRBase
cre-MIR1171
:
0.00009
PMRD
cre-miR1171
:
0.00009
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
download this record