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Species belonging to selected taxon:

Linum usitatissimum



ABOUT THIS RECORD

ID: MNEST001402
species: Linum usitatissimum
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Linum usitatissimum Linum Linaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA

miRNA*
ATGATGATGGTGGCGATGAAG

mismatches: 1
bulges: 0

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pre-miRNA
GTAAGAAGGAATCATCATCATCATCATCATCAATAGGCTCAGCTTCTATTGATTCCTCATCTTGTTTCTCTGACAGCAATGATGATGATGATGGTGGCGA
TGAAG
CATCTTCG


dot-bracket secondary structure
....(((((..(((((.(((((((((((((((.((.((((((.....((.(((.....)))..))....))))..))..)).))))))))))))))).))
)))..
..))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.0004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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