miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST001402
species: Linum usitatissimum
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Linum usitatissimum Linum Linaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA

miRNA*
ATGATGATGGTGGCGATGAAG

mismatches: 1
bulges: 0

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pre-miRNA
GTAAGAAGGAATCATCATCATCATCATCATCAATAGGCTCAGCTTCTATTGATTCCTCATCTTGTTTCTCTGACAGCAATGATGATGATGATGGTGGCGA
TGAAG
CATCTTCG


dot-bracket secondary structure
....(((((..(((((.(((((((((((((((.((.((((((.....((.(((.....)))..))....))))..))..)).))))))))))))))).))
)))..
..))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.0004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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