miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST002072
species: Pisum sativum
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Pisum sativum Pisum Fabeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACGTGCA

miRNA*
CACGTGCTGTCCTTCTCCAAC

mismatches: 3
bulges: 0

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pre-miRNA
CATTGGATGAGAAGCTCTTGATGGAGAAGCAGGGCACGTGCAAATCTTCATCTCATTCATTCCGTCAATGCATAAGAATATTTTGCACGTGCTGTCCTTC
TCCAAC
ACGACTTCCTCACCCTTA


dot-bracket secondary structure
....((.(((((((.((.((.((((((((...((((((((((((......(((.((.((((.....)))).)).)))....))))))))))))...))))
)))).)
).))))).)))).))...



SIMILARITIES
miRBase vvi-MIR164d: 0.0000000001

PMRD vvi-miR164d: 0.0000000001

microPC miR164: 0.00002
UniProt no hits

RFAM MIR164: 0.000000002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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