ABOUT THIS RECORDspecies: Pisum sativum
miRNA family: MIR164
source: miRNEST
Taxonomy by NCBI:
Pisum sativum Pisum Fabeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGAAGCAGGGCACGTGCA miRNA* CACGTGCTGTCCTTCTCCAAC mismatches: 3 bulges: 0 |
pre-miRNA
ACATTGGATGAGAAGCTCTTGATGGAGAAGCAGGGCACGTGCAAATCTTCATCTCATTCATTCCGTCAATGCATAAGAATATTTTGCACGTGCTGTCCTTC
TCCAACACGACTTCCTCACCCTTA
dot-bracket secondary structure
)....((.(((((((.((.((.((((((((...((((((((((((......(((.((.((((.....)))).)).)))....))))))))))))...))))
)))).)).))))).)))).))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACATTGGATGAGAAGCTCTTGATGGAGAAGCAGGGCACGTGCAAATCTTCATCTCATTCATTCCGTCAATGCATAAGAATATTTTGCACGTGCTGTCCTTC
TCCAACACGACTTCCTCACCCTTA
dot-bracket secondary structure
)....((.(((((((.((.((.((((((((...((((((((((((......(((.((.((((.....)))).)).)))....))))))))))))...))))
)))).)).))))).)))).))...
SIMILARITIES| miRBase vvi-MIR164d: 1.0E-10 PMRD vvi-miR164d: 1.0E-10 microPC miR164: 2.0E-5 | UniProt no hits RFAM 4MIR164: 2.0E-9 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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