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Species belonging to selected taxon:

Parthenium argentatum



ABOUT THIS RECORD

ID: MNEST001874
species: Parthenium argentatum
miRNA family: MIRf28
source: miRNEST

Taxonomy by NCBI:
Parthenium argentatum Parthenium Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTTGGTGTCGGTCGACACAG

miRNA*
TTGTCAAGCCTACACCAAATGC

mismatches: 5
bulges: 1

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pre-miRNA
CCAGAATTAGCCCTTGGTGTCGGTCGACACAGGGATGCCGGTGCTTTAACCATCTTGGCTCAAGACGCTGTAGGTGGTTTAGAAGTTAAACGAAAAACCG
ATGGAGAGTGGATCTTTGTCAAGCCTACACCAAATGCTTTCATTA


dot-bracket secondary structure
...(((..(((..(((((((.(((.((((.(((..((((((((((((((((((((((((.......)))).))))))))..)))))..........))))
.......)))..))).))))..))).)))))))..))))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q05964|FL3H_DIACA: 0.0000001

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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