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Species belonging to selected taxon:

Aristolochia fimbriata, Saruma henryi



ABOUT THIS RECORD

ID: MNEST000161
species: Aristolochia fimbriata
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Aristolochia fimbriata Aristolochia Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTGCGAGGAGCCAAGCATA

mismatches: 2
bulges: 0

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pre-miRNA
GAAAAGGGCTGTGCCTGGCTCCCTGTATGCCACACGTAGAGACCCATCTGTTTATGATCGGCTACTGCGGGTGGCGTGCGAGGAGCCAAGCATACCTCCT
CC


dot-bracket secondary structure
.....(((.(((((.(((((((.((((((((((.(((((((.((.(((.......))).)))).))))).)))))))))).))))))).))))))))...
..



SIMILARITIES
miRBase vvi-MIR160c: 0.000000000000001

PMRD vvi-miR160c: 0.000000000000001

microPC miR160: 1e-40
UniProt no hits

RFAM mir-160: 0.0000000000001
most similar mature miRNAs

Identical with: miR160 from microPC (MNEST046232)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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