miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Persea americana, Aristolochia fimbriata, Liriodendron tulipifera, Saruma henryi



ABOUT THIS RECORD

ID: MNEST000161
species: Aristolochia fimbriata
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Aristolochia fimbriata Aristolochia Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTGCGAGGAGCCAAGCATA

mismatches: 2
bulges: 0

View larger
pre-miRNA
GAAAAGGGCTGTGCCTGGCTCCCTGTATGCCACACGTAGAGACCCATCTGTTTATGATCGGCTACTGCGGGTGGCGTGCGAGGAGCCAAGCATACCTCCT
CC


dot-bracket secondary structure
.....(((.(((((.(((((((.((((((((((.(((((((.((.(((.......))).)))).))))).)))))))))).))))))).))))))))...
..



SIMILARITIES
miRBase vvi-MIR160c: 0.000000000000001

PMRD vvi-miR160c: 0.000000000000001

microPC miR160: 1e-40
UniProt no hits

RFAM mir-160: 0.0000000000001
most similar mature miRNAs

Identical with: miR160 from microPC (MNEST046232)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;