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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Cynodon dactylon
,
Eragrostis curvula
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Panicum virgatum
,
Pseudoroegneria spicata
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Cenchrus ciliaris
,
Brachypodium distachyon
,
Zea mays
,
Triticum aestivum
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST000530
species:
Cynodon dactylon
miRNA family:
MIR812
source:
miRNEST
Taxonomy by NCBI:
Cynodon dactylon
Cynodon
Eleusininae
Cynodonteae
Chloridoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGAATAAGACGAATGATCAA
miRNA*
GATCCTTCGTCTTATTTAAAA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TAGTATGTGTTACTCCCTCCGTCCGAAAATATAAGCATTTATTGATTTTTAGATATCATTTTT
GATCCTTCGTCTTATTTAAAA
AATTTGTAAAATATAA
AATTAAATAAGTCATATTTAAAGTATATCTAATGATAAAGTTGACTATAATAAAATTAATAATAATTTTATAACTATT
TTGAATAAGACGAATGATCAA
A
CATAAAATTCAAAAGTCAACAAATACTTATATTTCTGGACAAAGGGAGTACTCTGCTCG
dot-bracket secondary structure
.((((...((.(((((((..(((((.(((((((((.((((.(((((((((.(((...((.(((
((((.((((((((((((((((
...(((((((((....
.(((((...(((((..((((...(((.....))).))))..))))).........)))))....)))))))))...))
)))))))))))))).))))))
)
.))...))).))))))))).)))).))))))))).)))))..)))))))))..))))..
SIMILARITIES
miRBase
osa-MIR1884a
:
0.0000009
PMRD
osa-miRf10603-akr
:
0.0000002
microPC
miR1128
:
0.00005
UniProt
no hits
RFAM
MIR812: 0.00000000000007
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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